appA/1

appA/1
168

oligopeptide ABC transporter, inactive pseudogene in strain 168

Locus
BSU_11381
Protein length
154 aaSequenceBlast
Gene length
465 bpSequenceBlast
Function
unknown
Product
oligopeptide ABC transporter
Essential
no
E.C.
null
Synonyms
appA\/1
Outlinks
BsubCyc Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms

This gene is a member of the following regulons

Gene
Coordinates
1,213,537 → 1,214,001
The protein
Protein family
bacterial solute-binding protein 5 family (according to UniProt)
Structure
1XOC (PDB) (the intact protein) PubMed
Localization
attached to the cell membrane (via AppB-AppC) PubMed
Expression and Regulation
Operons
Genes
appD-appF-appA/1-appA/2-appB-appC
Description
PubMed
Regulation
repressed by CodY PubMed
Regulatory mechanism
TnrA: activation, PubMed, in tnrA regulon
CodY: repression, PubMed PubMed, in codY regulon
ScoC: repression, PubMed, in scoC regulon
Open in new tab

appD→appC

2025-03-26 06:06:54

Jstuelk

128

b46f08a2cd8f8540d1ae7be3ab793fb86c3b4d9c

D515582AF1C173F5A0D9E2C830FC884903502563

Biological materials
Mutant
GP2100 (D(''appD-appF-appA/2-appB-appC)::spc''), available in Jörg Stülke's lab
BKE11381 (ΔappA/1::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTAGATATTCCCCCTCTT,  downstream forward: _UP4_ATGCTGAAATCCGTAGAAAA
BKK11381 (ΔappA/1::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTAGATATTCCCCCTCTT,  downstream forward: _UP4_ATGCTGAAATCCGTAGAAAA
References
Loading

DD2C5F549759447FF1C30E5B43BCB74CE4320EF3

Page visits: 4454

Time of last update: 2025-04-06 04:21:01

Author of last update: Jstuelk