ligB

ligB
168

DNA ligase (ATP-dependent)

Locus
BSU_20500
Molecular weight
30.88 kDa
Isoelectric point
6.86
Protein length
270 aaSequenceBlast
Gene length
813 bpSequenceBlast
Function
phage SP-beta replication
Product
DNA ligase (ATP-dependent)
Essential
no
Synonyms
ligB, yoqV
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1793 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,192,370 → 2,193,182
The protein
Protein family
ATP-dependent DNA ligase family (C-terminal domain) (with LigD, according to UniProt)
Structure
6BKF (PDB) (human protein, 24% identity) PubMed
O31917 (AlphaFold)
Biological materials
Mutant
BKE20500 (ΔligB::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAAAATATCACCTCCTACTT,  downstream forward: _UP4_TAATCTCTCCGTTACATAAC
BKK20500 (ΔligB::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAAAATATCACCTCCTACTT,  downstream forward: _UP4_TAATCTCTCCGTTACATAAC
References
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Time of last update: 2025-04-04 16:51:03

Author of last update: Melvin.boenninger