remA

remA
168

transcriptional regulator of the extracellular matrix genes, acts in parallel to SinR, AbrB, and DegU

Locus
BSU_15670
Molecular weight
9.71 kDa
Isoelectric point
7.18
Protein length
89 aaSequenceBlast
Gene length
270 bpSequenceBlast
Function
control of biofilm formation
Product
regulator of the extracellular matrix genes
Essential
no
E.C.
null
Synonyms
remA, ylzA
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2052 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,641,672  1,641,941
The protein
Catalyzed reaction/ biological activity
binds opuAA, tapA, and epsA promoter regions (upstream of the actual promoter) to activate transcription PubMed
binds DNA with high co-operativity due to low conserrvation of binding sites PubMed
Protein family
RemA family (single member, according to UniProt)
Structure
7BM2 (PDB) PubMed
Q7WY72 (AlphaFold)
Expression and Regulation
Operons
Genes
yloC-remA-gmk-yloH
Description
PubMed
Regulation
expressed during vegetative growth and early during sporulation in the forespore (SigF) PubMed
Sigma factors
SigF: sigma factor, PubMed, in sigF regulon
Open in new tab

yloC->yloH

2025-04-04 08:01:09

Bzhu

143

b4ed2f235ea58a2cb7be55cafee822b895fe00c8

099190FEE74E539BB75FE227F5793536D7B467E8

Genes
yloC-remA-gmk-yloH-coaBC-priA-defA-fmt-yloM-yloN
Description
PubMed
Open in new tab

yloC->yloN

2025-04-04 08:04:53

Jstuelk

155

67080d1e476b4c1544f46abe5db9b45c3ccd93f3

2C39B75EDCD294B0CAC1DECB4007285A35FDAE1D

Genes
yloB-yloC-remA-gmk-yloH
Description
PubMed
Regulation
expressed during sporulation in the mother cell PubMed
Open in new tab

yloB->yloH

2025-04-03 13:34:29

Jstuelk

150

b15c1f28629d3e15db14719be44c291dd5f28c5f

86CE620BD4E14CC259270F542702B302B7837CCD

Biological materials
Mutant
BKE15670 (remA::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATCTTCTACGTTCCCCCTG,  downstream forward: _UP4_GATGAAGGGCAGGGGTAATT
BKK15670 (remA::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATCTTCTACGTTCCCCCTG,  downstream forward: _UP4_GATGAAGGGCAGGGGTAATT
Labs working on this gene/protein
Daniel Kearns, Indiana University, Bloomington, USA, homepage
References
Reviews
Loading
Original Publications
Loading

6AF1CB8998BE9C71DF4F1201A7F74FF7E75CB799

Page visits: 5996

Time of last update: 2025-04-05 22:04:52

Author of last update: Jstuelk