gerPD

gerPD
168

spore germination protein, facilitates access of nutrient germinants to their cognate germinant receptors in spores’ inner membrane

Locus
BSU_10690
Molecular weight
6.13 kDa
Isoelectric point
3.97
Protein length
58 aaSequenceBlast
Gene length
177 bpSequenceBlast
Function
germination
Product
unknown
Essential
no
Synonyms
gerPD, yisE
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG5909 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,149,145 → 1,149,321
The protein
Structure
O06718 (AlphaFold)
Expression and Regulation
Operons
Genes
gerPA-gerPB-gerPC-gerPD-gerPE-gerPF
Description
PubMed
Regulation
expressed during sporulation in the mother cell (SigK) PubMed
Regulatory mechanism
GerE: repression, in gerE regulon
Sigma factors
SigK: sigma factor, PubMed, in sigK regulon
Additional information
A ncRNA is predicted between 'gerPA' and 'yisI' PubMed
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gerPA→gerPF

2025-04-04 04:22:52

ghost

110

6fa2f0d08b48cd40ad0896e4e5b04f2b2cdd8e4a

C61A0A588140608A780E8D2989E7166E56693D05

Biological materials
Mutant
BKE10690 (ΔgerPD::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_GCTGCGGTTGATGACTGTAA,  downstream forward: _UP4_TTTGCTCCGCTTGCGCCAGA
BKK10690 (ΔgerPD::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_GCTGCGGTTGATGACTGTAA,  downstream forward: _UP4_TTTGCTCCGCTTGCGCCAGA
References
Reviews
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Original Publications
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F8658BB6D52793F8EC289FEC652241D729D72BF6

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Time of last update: 2025-04-05 10:25:34

Author of last update: Jstuelk