ypdP

ypdP
168

S protein of queuosine precursor (7-cyano-7-deazaguanine) ECF transporter

Locus
BSU_21980
Molecular weight
25.52 kDa
Isoelectric point
8.69
Protein length
229 aaSequenceBlast
Gene length
690 bpSequenceBlast
Function
queuosine precursor uptake
Product
S protein of queuosine precursor ECF transporter
Essential
no
Synonyms
ypdP
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1738 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,309,730  2,310,419
Phenotypes of a mutant
the mutant tends to acquire suppressor mutations that result in improved growth PubMed
The protein
Catalyzed reaction/ biological activity
uptake of 7-cyano-7-deazaguanine PubMed
Protein family
vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family (with ThiT and TrpP, according to UniProt)
Structure
P54163 (AlphaFold)
Localization
cell membrane (according to UniProt)
Expression and Regulation
Operons
Genes
ypdP-ypdQ
Description
PubMed
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ypdP→ypdQ

2025-04-04 07:57:21

ghost

71

cb4e98598297d5a64e55a5f7a05fb76b7814a436

B3E380ACD69B6A2D6879EFCC3BE476212DDBE567

Biological materials
Mutant
GP4790 (trpC2 ΔypdP::neo), available in Jörg Stülke's lab
MGNA-A872 (ypdP::erm), available at the NBRP B. subtilis, Japan
BKE21980 (ypdP::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAAGATGAAAAAGCTTCCTT,  downstream forward: _UP4_CCTAATGATGAAAGGAGTTC
BKK21980 (ypdP::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAAGATGAAAAAGCTTCCTT,  downstream forward: _UP4_CCTAATGATGAAAGGAGTTC
References
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7DD4BB8222B2EFE81C32C5521A29256095B9D6C1

Page visits: 2047

Time of last update: 2025-04-02 11:22:48

Author of last update: Robert.warneke