ybfO

ybfO
168

similar to erythromycin esterase

Locus
BSU_02310
Molecular weight
51.62 kDa
Isoelectric point
6.68
Protein length
446 aaSequenceBlast
Gene length
1341 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
Synonyms
ybfO
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2312 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
249,979 → 251,319
The protein
Structure
2QGM (PDB) (23% identity)
O31455 (AlphaFold)
Localization
extracellular (signal peptide) PubMed
Expression and Regulation
Operons
Genes
ybfO-ybfP-ybfQ
Description
PubMed
Regulation
repressed during logarithmic growth (AbrB) PubMed
Regulatory mechanism
AbrB: repression, PubMed, in abrB regulon
Sigma factors
SigW: sigma factor, PubMed, in sigW regulon
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ybfO→ybfQ

2025-03-11 21:28:05

Jstuelk

119

50a945625df291fbb5df9027fa7857ca92a76e0e

38EAB2C0FEF8D67A055D05FB47AFE694C464191E

Genes
ybfO-ybfP
Description
PubMed
Regulation
repressed during logarithmic growth (AbrB) PubMed
Open in new tab

ybfO→ybfP

2025-03-15 22:26:38

Jstuelk

69

fe15add8629dec9297e9ad34a6ce932400a411a1

44F8E545FEA0CBD4F342C5F2356F2692EFBA9996

Genes
ybfO
Description
(according to DBTBS) null
Regulation
repressed during logarithmic growth (AbrB) PubMed
Additional information
translation is likely to require Efp due to the presence of several consecutive proline residues PubMed
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ybfO

2025-03-15 01:17:18

ghost

65

6d97d277f540db357f4c18f2fd025bbbb85d0783

94768F983E7CF5D42D5AC82094A0CAE07A1A8186

Additional information
translation is likely to require Efp due to the presence of several consecutive proline residues PubMed
Biological materials
Mutant
MGNA-B935 (ybfO::erm), available at the NBRP B. subtilis, Japan
BKE02310 (ΔybfO::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAATTCTATCTCTCCTTTTC,  downstream forward: _UP4_TGAGCGGTGTCCCCTGTGGT
BKK02310 (ΔybfO::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAATTCTATCTCTCCTTTTC,  downstream forward: _UP4_TGAGCGGTGTCCCCTGTGGT
References
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BA60CF44ECA4937FA5C1720B10E7FDABA9AB4664

Page visits: 3791

Time of last update: 2025-03-16 19:41:29

Author of last update: Jstuelk