yfiC

yfiC
168

similar to ABC transporter (membrane protein)

Locus
BSU_08220
Molecular weight
67.22 kDa
Isoelectric point
9.62
Protein length
604 aaSequenceBlast
Gene length
1815 bpSequenceBlast
Function
unknown
Product
ABC transporter (membrane protein)
Essential
no
Synonyms
yfiC
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1132 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
895,619 → 897,433
The protein
Protein family
ABC transporter superfamily (according to UniProt)
Domains
has both a membrane-spanning and an ATP-binding domain PubMed
ABC transmembrane type-1 domain (aa 49-332) (according to UniProt)
ABC transporter domain (aa 366-600) (according to UniProt)
Structure
3QF4 (PDB) (YfiB-YfiC complex from Thermotoga maritima, 48% identity) PubMed
P54719 (AlphaFold)
Paralogous protein(s)
BmrA, YknU, YknV, YgaD, YwjA, BmrC, YfiB
Localization
cell membrane PubMed
Expression and Regulation
Operons
Genes
yfiB-yfiC
Description
PubMed
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yfiB→yfiC

2025-03-16 13:01:26

Jstuelk

74

4c57fdf34e3ec7eb7b03ff0d8072df76ee03fc27

8BC3C441B6D7A4146D2BF5E5541BE11627299F1B

Biological materials
Mutant
MGNA-C293 (yfiC::erm), available at the NBRP B. subtilis, Japan
BKE08220 (ΔyfiC::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_TTGGAAAGGCTTGCGGATGT,  downstream forward: _UP4_TAGACCTTTGTCCTGCACAG
BKK08220 (ΔyfiC::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_TTGGAAAGGCTTGCGGATGT,  downstream forward: _UP4_TAGACCTTTGTCCTGCACAG
References
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E85814EDF232D21A42380D559EAD2CDFB41F19DB

Page visits: 1829

Time of last update: 2025-03-17 20:59:07

Author of last update: Jstuelk