xkdO

xkdO
168

PBSX prophage, putative cell wall hydrolase (N-acetylglucosamidase)

Locus
BSU_12680
Molecular weight
144.92 kDa
Isoelectric point
10.1
Protein length
1332 aaSequenceBlast
Gene length
3999 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
E.C.
null
Synonyms
xkdO
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG3953 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,334,966 → 1,338,964
The protein
Structure
P54334 (AlphaFold)
Expression and Regulation
Operons
Genes
xtmA-xtmB-xkdE-xkdF-xkdG-xkdH-xkdI-xkdJ-xkdK-xkdM-xkdN-xkzB-xkdO-xkdP-xkdQ-xkdR-xkdS-xkdT-xkdU-xkzA-xkdV-xkdW-xkdX-xepA-xhlA-xhlB-xlyA
Description
PubMed
Regulation
expression during spore germination is strongly reduced under conditions of osmotic stress PubMed
Sigma factors
Xpf: sigma factor, PubMed, in xpf regulon
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xtmA→xlyA

2025-03-07 01:50:34

Jstuelk

140

cf834a1eded0c80a87b885b56423c31a910431c3

B52CA80EBED69B6B9017B7E04DFFD42F17910C15

Biological materials
Mutant
BKE12680 (ΔxkdO::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_AAAACGGGCTGTTAATTTTG,  downstream forward: _UP4_ATTGGAACGAAGGGAGTCGT
BKK12680 (ΔxkdO::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_AAAACGGGCTGTTAATTTTG,  downstream forward: _UP4_ATTGGAACGAAGGGAGTCGT

CD97483876F4FCCE451AD4F2A8AFD6F560074769

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Time of last update: 2025-03-12 11:12:24

Author of last update: Jstuelk