licR

licR
168

transcriptional activator of the licB-licC-licA-licH operon

Locus
BSU_38600
Molecular weight
73.14 kDa
Isoelectric point
6.11
Protein length
641 aaSequenceBlast
Gene length
1926 bpSequenceBlast
Function
regulation of lichenan utilization
Product
transcriptional activator, PRD-type
Essential
no
E.C.
2.7.1.69
Synonyms
licR, celR
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG3711 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,962,003 → 3,963,928
The protein
Protein family
PRD-containing transcription factors
Domains
2 PRD domains (aa 184-289, aa 296-403)
PTS EIIB domain type-2 (aa 407-498)
PTS EIIA domain type-2 (aa 499-638)
Structure
P46321 (AlphaFold)
Modification
phosphorylation (His219, His278, His333, His392, Cys413, His559) (according to Swiss-Prot)
Expression and Regulation
Operons
Genes
licR
Description
PubMed
Sigma factors
SigA: sigma factor, PubMed, in sigA regulon
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licR

2025-03-09 04:24:44

ghost

77

d5c10ad343c980faac629b1d1f6976efe1029338

E6126F116E19941A13BA7F262EBCEBF2D41CD477

Biological materials
Mutant
BKE38600 (ΔlicR::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGAGAAAAACCTCCTAAC,  downstream forward: _UP4_TGACAGCCTGTATATACCTT
BKK38600 (ΔlicR::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGAGAAAAACCTCCTAAC,  downstream forward: _UP4_TGACAGCCTGTATATACCTT
References
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E087ABA705CE94E2CAD44A0F2FB265B0F7B04399

Page visits: 3795

Time of last update: 2025-03-11 22:45:14

Author of last update: Melvin.boenninger