ykaA

ykaA
168

unknown

Locus
BSU_12850
Molecular weight
23.70 kDa
Isoelectric point
4.91
Protein length
205 aaSequenceBlast
Gene length
618 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
Synonyms
ykaA
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1392 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,350,482 → 1,351,099
The protein
Protein family
UPF0111 family (single member, according to UniProt)
Structure
3L39 (PDB) (from Bacteroides thetaiotamicron, 28% identity)
O34454 (AlphaFold)
Expression and Regulation
Operons
Genes
ykaA-pit
Description
PubMed
Regulation
repressed under conditions that trigger sporulation (Spo0A) PubMed
Regulatory mechanism
Spo0A: repression, PubMed, in spo0A regulon
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ykaA→pit

2025-03-09 10:03:28

Jstuelk

71

2ed1877d9dfaff66f8b42e50fd3374707efbf2e3

310EECD78ADFC2787122CD7693BA45E418C873FE

Biological materials
Mutant
MGNA-B307 (ykaA::erm), available at the NBRP B. subtilis, Japan
BKE12850 (ΔykaA::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTAAAAACCCTCCATAGT,  downstream forward: _UP4_TAACGAGGGGTAAAAATGGA
BKK12850 (ΔykaA::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTAAAAACCCTCCATAGT,  downstream forward: _UP4_TAACGAGGGGTAAAAATGGA
References
Reviews
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Original Publications
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BBA93C5BAA044DA61A2D1E0EE850A12391E8A3E3

Page visits: 2635

Time of last update: 2025-03-14 21:56:28

Author of last update: Jstuelk