Difference between revisions of "SpoIIID"
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* '''Operon:''' ''[[usd]]-[[spoIIID]]-[[mbl]]-[[flhO]]-[[flhP]]'' {{PubMed|9023218,7836311}} | * '''Operon:''' ''[[usd]]-[[spoIIID]]-[[mbl]]-[[flhO]]-[[flhP]]'' {{PubMed|9023218,7836311}} | ||
− | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIIID_3748421_3748702_-1 spoIIID] {{PubMed|22383849}} |
+ | |||
+ | * '''Sigma factor:''' [[SigE]] {{PubMed|9023218}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
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* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
− | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = |
Revision as of 08:06, 17 April 2012
Gene name | spoIIID |
Synonyms | |
Essential | no |
Product | transcriptional regulator |
Function | regulation of mother cell gene expression |
Metabolic function and regulation of this protein in SubtiPathways: Asp, Asn, Cell wall | |
MW, pI | 10 kDa, 9.496 |
Gene length, protein length | 279 bp, 93 aa |
Immediate neighbours | mbl, usd |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context ![]() This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
transcription factors and their control, sporulation proteins
This gene is a member of the following regulons
The SpoIIID regulon
The gene
Basic information
- Locus tag: BSU36420
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: binds its DNA targets as a monomeric protein (possible due to the two DNA-binding motifs) PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains: two DNA-binding regions: HTH at the N-terminus and a basic region near the C-terminus PubMed
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure: 2L0K (complex with DNA)
- UniProt: P15281
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed